date: 2025-12-26

Ya tengo configurado Julia y puedo cargar las imágenes, ahora tengo que probar un poco cómo visualizar mejor los resultados y el overlay de las anotaciones.

Tengo un par de ideas para iniciar la charla con Agus, antes de entrar a revisar el paper de [CellSam][https://www.nature.com/articles/s41592-025-02879-w]

Antes de seguir voy a hacer un poco de investigación de la estructura del dataset

> tree -L3 data data ├── annotations │   └── annotations │   ├── samplesubmission.csv │   ├── train.csv │   └── val.csv └── images └── images ├── test ├── train └── val

8 directories, 3 files

> du data/images/images/* | to md | save -a ~/para/areas/dev/gh/ak/journal/laboratorio/papriva.org

path apparent physical
/var/home/sasha/para/areas/dev/gh/phorma/PAPRIVA/data/images/images/test 97.1 MB 97.3 MB
/var/home/sasha/para/areas/dev/gh/phorma/PAPRIVA/data/images/images/train 1.2 GB 1.2 GB
/var/home/sasha/para/areas/dev/gh/phorma/PAPRIVA/data/images/images/val 201.3 MB 201.6 MB

> du data/images/images/**/* | select physical | each { $in.physical / 1kb | math round –precision -2} | histogram | to md | save -a ~/para/areas/dev/gh/ak/journal/laboratorio/papriva.org

value count quantile percentage frequency
1400.0 241 0.23106423777564716 23.11% *********************
1500.0 216 0.20709491850431447 20.71% ******************
1600.0 159 0.15244487056567593 15.24% *************
1300.0 159 0.15244487056567593 15.24% *************
1700.0 81 0.07766059443911794 7.77% *****
1200.0 56 0.053691275167785234 5.37% ***
1800.0 45 0.04314477468839885 4.31% **
1900.0 25 0.023969319271332695 2.40% **
1100.0 12 0.011505273250239693 1.15% *
2000.0 10 0.009587727708533078 0.96%
2200.0 9 0.00862895493767977 0.86%
1000.0 8 0.007670182166826462 0.77%
900.0 7 0.006711409395973154 0.67%
2100.0 7 0.006711409395973154 0.67%
800.0 2 0.0019175455417066154 0.19%
700.0 2 0.0019175455417066154 0.19%
201600.0 1 0.0009587727708533077 0.10%
600.0 1 0.0009587727708533077 0.10%
97400.0 1 0.0009587727708533077 0.10%
1242100.0 1 0.0009587727708533077 0.10%